Publications

  • 2023

    Sophie Viala^, Charlotte Hadjadj, Vandana Nathan, Marie-Christine Guiot, Luke McCaffrey, Katie Cockburn, Maxime Bouchard. LGN loss randomizes spindle orientation and accelerates tumorigenesis in PTEN-deficient epidermis. Molecular Biology of the Cell. 2023, in press.

    Dennis May*, Sangwon Yun*, David G. Gonzalez, Sangbum Park, Yanbo Chen, Elizabeth Lathrop, Biao Cai, Tianchi Xin, Hongyu Zhao, Siyuan Wang, Lauren E. Gonzalez^, Katie Cockburn^, Valentina Greco^. Live imaging reveals chromatin compaction transitions and dynamic transcriptional bursting during stem cell differentiation in vivo. Elife. 2023 Mar 7;12:e83444.

  • 2022

    Katie Cockburn*, Karl Annusver*, Smirthy Ganesan, Kailin R. Mesa, Kyogo Kawaguchi, Maria Kasper^, Valentina Greco^. Gradual differentiation uncoupled from cell cycle exit generates heterogeneity in the epidermal stem cell layer. Nature Cell Biology. 2022 Dec;24(12):1692-1700

    Takaki Yamamoto, Katie Cockburn, Valentina Greco, Kyogo Kawaguchi. Probing the rules of cell coordination in live tissues by interpretable machine learning based on graph neural networks. PloS Computational Biology. 2022 Sep 6;18(9):e1010477.

  • 2021

    Sangbum Park* , Catherine Matte-Martone*, David G Gonzalez, Elizabeth A Lathrop, Dennis P May, Cristiana M Pineda, Jessica L Moore, Jonathan D Boucher, Edward Marsh, Axel Schmitter-Sánchez , Katie Cockburn, Olga Markova, Yohanns Bellaïche, Valentina Greco. Skin-resident immune cells actively coordinate their distribution with epidermal cells during homeostasis. Nature Cell Biology. 2021 May 6;23(5):476-484

  • 2019

    Eiichi Okamura, Oliver H Tam, Eszter Posfai, Lingyu Li, Katie Cockburn, Cheryl Q E Lee, Jodi Garner, Janet Rossant. Esrrb function is required for proper primordial germ cell development in presomite stage mouse embryos. Developmental Biology. 2019 Nov 15;455(2):382-392

    Karen Tai, Katie Cockburn^, Valentina Greco^. Flexibility sustains epithelial tissue homeostasis. Current Opinion in Cell Biology. 2019 Oct;60:84-91

  • 2018

    Kailin R Mesa*, Kyogo Kawaguchi*, Katie Cockburn*^, David Gonzalez, Jonathan Boucher, Tianchi Xin, Allon M Klein^, Valentina Greco^. Homeostatic Epidermal Stem Cell Self-Renewal Is Driven by Local Differentiation. Cell Stem Cell. 2018 Nov 1;23(5):677-686.e4

  • 2017

    Bin Gu, Jean-Philippe Lambert, Katie Cockburn, Anne-Claude Gingras, Janet Rossant . AIRE is a critical spindle-associated protein in embryonic stem cells. eLife. 2017 Jul 25;6:e28131

    Sangbum Park, David G Gonzalez, Boris Guirao, Jonathan D Boucher, Katie Cockburn, Edward D Marsh, Kailin R Mesa, Samara Brown, Panteleimon Rompolas, Ann M Haberman, Yohanns Bellaïche, Valentina Greco. Tissue-scale coordination of cellular behaviour promotes epidermal wound repair in live mice. Nature Cell Biology. 2017 Mar 1;19(2):155-163

  • 2016

    Sangbum Park, Valentina Greco^, Katie Cockburn^. Live imaging of stem cells: answering old questions and raising new ones. Current Opinion in Cell Biology. 2016 2016 Dec;43:30-37

    Laleh Abbassi, Safia Malki, Katie Cockburn, Angus Macaulay, Claude Robert, Janet Rossant, Hugh J Clarke. Multiple Mechanisms Cooperate to Constitutively Exclude the Transcriptional Co-Activator YAP from the Nucleus During Murine Oogenesis. Biology of Reproduction. 2016 May;94(5):102

  • 2014

    Teresa Rayon, Sergio Menchero, Andres Nieto, Panagiotis Xenopoulos , Miguel Crespo, Katie Cockburn, Susana Cañon, Hiroshi Sasaki, Anna-Katerina Hadjantonakis, Jose Luis de la Pompa, Janet Rossant, Miguel Manzanares. Developmental Cell. 2014 Aug 25;30(4):410-22

  • 2013

    Katie Cockburn, Steffen Biechele, Jodi Garner, Janet Rossant. The Hippo pathway member Nf2 is required for inner cell mass specification. Current Biology. 2013 Jul 8;23(13):1195-201

    Steffen Biechele, Katie Cockburn, Fredrik Lanner, Brian J Cox, Janet Rossant. Porcn-dependent Wnt signaling is not required prior to mouse gastrulation. Development. 2013 Jul;140(14):2961-71

    Greg M Findlay, Matthew J Smith, Fredrik Lanner, Marilyn S Hsiung, Gerald D Gish, Evangelia Petsalaki, Katie Cockburn, Tomonori Kaneko, Haiming Huang, Richard D Bagshaw, Troy Ketela, Monika Tucholska, Lorne Taylor, David D Bowtell, Jason Moffat, Mitsuhiko Ikura, Shawn S C Li, Sachdev S Sidhu, Janet Rossant, Tony Pawson. Interaction domains of Sos1/Grb2 are finely tuned for cooperative control of embryonic stem cell fate. Cell. 2013 Feb 28;152(5):1008-20

  • 2012 and earlier

    Yoshikazu Hirate, Katie Cockburn, Janet Rossant, Hiroshi Sasaki. Tead4 is constitutively nuclear, while nuclear vs. cytoplasmic Yap distribution is regulated in preimplantation mouse embryos. Proceedings of the National Academy of Sciences. 2012. Dec 11;109(50):E3389-90

    Xaralabos Varelas, Payman Samavarchi-Tehrani, Masahiro Narimatsu, Alexander Weiss, Katie Cockburn, Brett G Larsen, Janet Rossant, Jeffrey L Wrana. The Crumbs complex couples cell density sensing to Hippo-dependent control of the TGF-β-SMAD pathway. Developmental Cell. 2010 Dec 14;19(6):831-44

    Katie Cockburn, Janet Rossant. Making the blastocyst: lessons from the mouse. Journal of Clinical Investigation. 2010. Apr;120(4):995-1003

    Timothy P O'Connor, Katie Cockburn, Wenyan Wang, Lucia Tapia, Erin Currie, Shernaz X Bamji. Semaphorin 5B mediates synapse elimination in hippocampal neurons. Neural Development. 2009 May 23;4:18